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BLAST

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BLAST
Software
Wikipedia articleDbpedia source
In bioinformatics, BLAST for Basic Local Alignment Search Tool is an algorithm for comparing primary biological sequence information, such as the amino-acid sequences of different proteins or the nucleotides of DNA sequences. A BLAST search enables a researcher to compare a query sequence with a library or database of sequences, and identify library sequences that resemble the query sequence above a certain threshold. Different types of BLASTs are available according to the query sequences. For example, following the discovery of a previously unknown gene in the mouse, a scientist will typically perform a BLAST search of the human genome to see if humans carry a similar gene; BLAST will identify sequences in the human genome that resemble the mouse gene based on similarity of sequence. The BLAST program was designed by Stephen Altschul, Warren Gish, Webb Miller, Eugene Myers, and David J. Lipman at the NIH and was published in the Journal of Molecular Biology in 1990.
Latest release version 2.2.29+
English Wikipedia http://en.wikipedia.org/wiki/BLAST
Spanish wikipedia http://es.wikipedia.org/wiki/BLAST
Wiki page external link ftp://ftp.ncbi.nlm.nih.gov/blast/db/ ftp://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/LATEST/ ftp://ftp.ncbi.nlm.nih.gov/pub/agarwala/windowmasker/windowmasker_suppl.pdf http://archimedes.cheme.cmu.edu/?q=gpublast http://bighost.area.ba.cnr.it/BIG/GCGManual/xnu.html http://blast.ncbi.nlm.nih.gov/ http://blast.ncbi.nlm.nih.gov/Blast.cgi http://blast.ncbi.nlm.nih.gov/Blast.cgi?CMD=Web&PAGE_TYPE=BlastDocs&DOC_TYPE=Download http://blast.wustl.edu/ http://fsa-blast.sourceforge.net/ http://mitc-openbio.sourceforge.net/ http://omics.pnl.gov/software/ScalaBLAST.php http://www.advbiocomp.com/blast.html http://www.clcbio.com/wp-content/uploads/2012/01/CLC_pressrelease_100112.pdf http://www.comp.hkbu.edu.hk/~chxw/software/G-BLASTN.html http://www.cshprotocols.org/cgi/content/full/2007/14/pdb.top17 http://www.itl.nist.gov/div898/handbook/eda/section3/eda366g.htm http://www.ncbi.nlm.nih.gov/BLAST/ http://www.ncbi.nlm.nih.gov/Class/FieldGuide/BLOSUM62.txt http://www.ncbi.nlm.nih.gov/Education/BLASTinfo/Seg.html http://www.ncbi.nlm.nih.gov/books/NBK1734/ http://www.nvidia.com/object/blastp_on_tesla.html http://www.timelogic.com http://www.timelogic.com/decypher_blast.html

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Fecha publicación: 15.4.2015

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